Includes dependencies only from the runtime configurations. That is, no compile dependecies, just the ones that end up in the packaged application by using a new configuration property runtimeConfigurationsOnly:

nexusIQScan {
  username = 'user'
  password = 'password'
  serverUrl = 'http://localhost:8070'
  applicationId = project.name
  runtimeConfigurationsOnly = true
}

(If there are changes to user behavior in general, please make sure to
update the docs, as well)

It relates to the following issue #s:

• Fixes [BUG] Component differences between reports produced by NexusIQ CLI and Gradle plugin #145

cc @bhamail / @DarthHater / @shaikhu